高通量16s测序数据自动化处理方法

Automatic treatment method of high-throughput 16S sequencing data

Abstract

The invention discloses an automatic treatment method of high-throughput 16S sequencing data. The automatic treatment method comprises the following steps of 1), inputting the information of a to-be-analyzed project; 2), calling the high-throughput 16S sequencing data from a server for storing data; 3), carrying out pretreatment on obtained data of the corresponding project; 4), noting a high-quality sequence, and starting to carry out a standard analysis procedure; 5), checking a log, and guaranteeing the infallibility of a result. The automatic treatment method has the beneficial effects that, on the basis of the automatic analysis procedure of a linux shell, the batch project analysis can be carried out; the service efficiency of the server is improved; the analysis pressure of an analyzer is reduced; an analyzed content is controlled conveniently.
本发明公开的高通量16S测序数据自动化处理方法,包括如下步骤:1)输入要进行分析的项目信息;2)从存储数据的服务器调取高通量16S测序数据;3)将获取的对应项目的数据进行预处理;4)将优质序列进行注释,并开始进行标准分析流程;5)查看日志,保证结果的无误性。本发明的有益效果在于:基于linux shell的自动化分许流程,可进行批量项目分析,提高服务器使用效率,减少分析人员的分析压力,便于控制分析内容。

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